| Detail |
Ctyoband |
LncRNAs |
miRNAs |
mRNAs |
FDR |
Disease |
 |
 | 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 1.80E-53 | BLCA |       |
| 12p13.31 | C1RL-AS1 | hsa-miR-24-3p | HNF4A | 6.30E-51 | BRCA | |
| 14q23.1 | PSMA3-AS1 | hsa-miR-143-3p | HNF4A | 9.45E-32 | OV | |
| 22q12.2 | TUG1 | hsa-miR-29b-3p | HNF4A | 5.82E-31 | UCEC | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 5.44E-27 | COAD | |
| 22q12.2 | TUG1 | hsa-miR-29b-3p | HNF4A | 2.56E-26 | BLCA | |
| 1p36.33 | RP4-758J18.2 | hsa-miR-29b-3p | HNF4A | 4.20E-25 | SKCM | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 7.77E-22 | KIRC | |
| 14q23.1 | PSMA3-AS1 | hsa-miR-143-3p | HNF4A | 2.26E-21 | BLCA | |
| 12q24.31 | LINC01089 | hsa-miR-766-3p | HNF4A | 8.11E-21 | SKCM | |
| 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 1.23E-20 | CESC | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 3.42E-20 | STAD | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 2.61E-18 | SKCM | |
| 1p36.12 | LINC00339 | hsa-miR-24-3p | HNF4A | 1.17E-17 | LIHC | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 1.90E-17 | BLCA | |
| 17q21.31 | ASB16-AS1 | hsa-miR-34a-5p | HNF4A | 3.63E-17 | SKCM | |
| 17q21.31 | ASB16-AS1 | hsa-miR-766-3p | HNF4A | 5.00E-17 | SKCM | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 5.60E-17 | PRAD | |
| 22q12.2 | TUG1 | hsa-miR-29b-3p | HNF4A | 1.04E-16 | HNSC | |
| 15q26.1 | LINC01578 | hsa-miR-29b-3p | HNF4A | 1.21E-16 | SKCM | |
| 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 1.78E-16 | COAD | |
| 12q24.31 | LINC01089 | hsa-miR-766-3p | HNF4A | 3.76E-16 | LUAD | |
| 6p22.1 | HCG18 | hsa-miR-449a | HNF4A | 8.27E-16 | CESC | |
| 20q13.13 | ZFAS1 | hsa-miR-34b-5p | HNF4A | 3.90E-15 | SKCM | |
| 20q13.13 | ZFAS1 | hsa-miR-34b-5p | HNF4A | 5.47E-15 | HNSC | |
| 22q13.31 | NUP50-AS1 | hsa-miR-765 | HNF4A | 6.41E-15 | LGG | |
| 8q24.21 | PVT1 | hsa-miR-24-3p | HNF4A | 1.81E-14 | COAD | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 2.17E-14 | KIRP | |
| 20p11.21 | ZNF337-AS1 | hsa-miR-449a | HNF4A | 3.99E-14 | PRAD | |
| 3q13.12 | LINC00882 | hsa-miR-766-3p | HNF4A | 8.57E-14 | LGG | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 1.80E-13 | BLCA | |
| 17q21.31 | ASB16-AS1 | hsa-miR-34a-5p | HNF4A | 2.27E-13 | COAD | |
| 17q21.31 | ASB16-AS1 | hsa-miR-766-3p | HNF4A | 2.65E-13 | COAD | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-216a-5p | HNF4A | 2.86E-13 | BLCA | |
| 12q24.31 | LINC01089 | hsa-miR-766-3p | HNF4A | 3.56E-13 | PRAD | |
| 20q13.13 | ZFAS1 | hsa-miR-34b-5p | HNF4A | 6.38E-13 | STAD | |
| 5p15.33 | PP7080 | hsa-miR-766-3p | HNF4A | 1.01E-12 | HNSC | |
| 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 1.90E-12 | SKCM | |
| 8q24.21 | PVT1 | hsa-miR-24-3p | HNF4A | 2.59E-12 | HNSC | |
| 20q11.23 | SNHG17 | hsa-miR-143-3p | HNF4A | 3.10E-12 | STAD | |
| 1q25.1 | GAS5 | hsa-miR-34c-5p | HNF4A | 7.34E-12 | SARC | |
| 1q25.1 | GAS5 | hsa-miR-766-3p | HNF4A | 7.40E-12 | SARC | |
| 5q15 | NR2F1-AS1 | hsa-miR-766-3p | HNF4A | 7.69E-12 | BRCA | |
| 5q15 | NR2F1-AS1 | hsa-miR-24-3p | HNF4A | 8.25E-12 | BRCA | |
| 5q15 | NR2F1-AS1 | hsa-miR-29b-3p | HNF4A | 8.34E-12 | BRCA | |
| 9q34.3 | SNHG7 | hsa-miR-765 | HNF4A | 2.76E-11 | SKCM | |
| 9q34.3 | SNHG7 | hsa-miR-34a-5p | HNF4A | 3.14E-11 | SKCM | |
| 9q34.3 | SNHG7 | hsa-miR-766-3p | HNF4A | 3.24E-11 | SKCM | |
| 9q34.3 | SNHG7 | hsa-miR-24-3p | HNF4A | 3.28E-11 | SKCM | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 3.76E-11 | LIHC | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 1.05E-10 | KIRC | |
| 14q23.1 | PSMA3-AS1 | hsa-miR-143-3p | HNF4A | 2.66E-10 | ESCA | |
| 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 3.10E-10 | TGCT | |
| 9p21.1 | B4GALT1-AS1 | hsa-miR-34a-5p | HNF4A | 4.03E-10 | KIRP | |
| 14q23.1 | PSMA3-AS1 | hsa-miR-143-3p | HNF4A | 6.68E-10 | CESC | |
| 12p13.31 | C1RL-AS1 | hsa-miR-24-3p | HNF4A | 8.77E-10 | LUAD | |
| 16q22.2 | LINC01572 | hsa-miR-629-5p | HNF4A | 4.54E-9 | BRCA | |
| 1p36.33 | RP4-758J18.2 | hsa-miR-29b-3p | HNF4A | 6.34E-9 | LIHC | |
| 12q13.13 | RP11-983P16.4 | hsa-miR-765 | HNF4A | 1.68E-8 | LIHC | |
| 5p15.31 | MIR4458HG | hsa-miR-766-3p | HNF4A | 1.14E-7 | LIHC | |
| 5p15.31 | MIR4458HG | hsa-miR-29b-3p | HNF4A | 1.33E-7 | LIHC | |
| 20q11.23 | SNHG17 | hsa-miR-143-3p | HNF4A | 1.84E-7 | HNSC | |
| 1p36.33 | RP4-758J18.2 | hsa-miR-29b-3p | HNF4A | 2.16E-7 | COAD | |
| 8p21.1 | EXTL3-AS1 | hsa-miR-24-3p | HNF4A | 2.42E-7 | LUAD | |
| 8p21.1 | EXTL3-AS1 | hsa-miR-24-3p | HNF4A | 4.56E-7 | BLCA | |
| 1q25.1 | GAS5 | hsa-miR-34c-5p | HNF4A | 5.22E-7 | SKCM | |
| 10q22.3 | TMEM254-AS1 | hsa-miR-143-3p | HNF4A | 5.22E-7 | KIRC | |
| 1q25.1 | GAS5 | hsa-miR-766-3p | HNF4A | 5.67E-7 | SKCM | |
| 3p25.3 | THUMPD3-AS1 | hsa-miR-29b-3p | HNF4A | 5.72E-7 | ESCA | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 7.24E-7 | CESC | |
| 12q24.31 | LINC01089 | hsa-miR-766-3p | HNF4A | 1.31E-6 | BRCA | |
| 8q13.1 | SNHG6 | hsa-miR-766-3p | HNF4A | 2.06E-6 | SKCM | |
| 22q13.31 | NUP50-AS1 | hsa-miR-765 | HNF4A | 2.14E-6 | UCEC | |
| 12p13.31 | C1RL-AS1 | hsa-miR-24-3p | HNF4A | 2.58E-6 | KIRC | |
| 3q21.3 | H1FX-AS1 | hsa-miR-766-3p | HNF4A | 2.95E-6 | SKCM | |
| 7p13 | SNHG15 | hsa-miR-766-3p | HNF4A | 3.14E-6 | COAD | |
| 8q13.1 | SNHG6 | hsa-miR-34a-5p | HNF4A | 3.47E-6 | SKCM | |
| 21q22.3 | MCM3AP-AS1 | hsa-miR-766-3p | HNF4A | 6.01E-6 | PAAD | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-216a-5p | HNF4A | 8.69E-6 | LIHC | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 9.57E-6 | LIHC | |
| 20q11.21 | ABALON | hsa-miR-766-3p | HNF4A | 2.04E-5 | ESCA | |
| 12q13.13 | RP11-983P16.4 | hsa-miR-765 | HNF4A | 2.27E-5 | BLCA | |
| 7q22.1 | AC004893.11 | hsa-miR-34a-5p | HNF4A | 2.54E-5 | SKCM | |
| 18q21.1 | SNHG22 | hsa-miR-766-3p | HNF4A | 2.79E-5 | ESCA | |
| 11p15.5 | KCNQ1OT1 | hsa-miR-29b-3p | HNF4A | 3.46E-5 | STAD | |
| 9q34.11 | LINC00963 | hsa-miR-24-3p | HNF4A | 3.97E-5 | LUSC | |
| 9p21.1 | B4GALT1-AS1 | hsa-miR-34a-5p | HNF4A | 4.59E-5 | PAAD | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 4.62E-5 | ESCA | |
| 17q21.31 | ASB16-AS1 | hsa-miR-766-3p | HNF4A | 7.11E-5 | READ | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 8.09E-5 | CESC | |
| 17q21.31 | ASB16-AS1 | hsa-miR-34a-5p | HNF4A | 8.61E-5 | READ | |
| 2q37.3 | AC062017.1 | hsa-miR-766-3p | HNF4A | 1.37E-4 | SKCM | |
| 10q22.3 | TMEM254-AS1 | hsa-miR-143-3p | HNF4A | 2.08E-4 | SARC | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-216a-5p | HNF4A | 2.19E-4 | PAAD | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 2.96E-4 | PAAD | |
| 17p13.3 | MIR22HG | hsa-miR-34a-5p | HNF4A | 2.98E-4 | OV | |
| 12p13.31 | C1RL-AS1 | hsa-miR-24-3p | HNF4A | 5.07E-4 | TGCT | |
| 17p13.3 | MIR22HG | hsa-miR-449a | HNF4A | 5.53E-4 | OV | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 6.24E-4 | STAD | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 7.00E-4 | CESC | |
| 9p21.1 | B4GALT1-AS1 | hsa-miR-34a-5p | HNF4A | 7.95E-4 | LIHC | |
| 20p11.21 | ZNF337-AS1 | hsa-miR-449a | HNF4A | 9.83E-4 | CESC | |
| 9q34.11 | LINC00963 | hsa-miR-24-3p | HNF4A | 1.08E-3 | LUAD | |
| 16q24.1 | FENDRR | hsa-miR-766-3p | HNF4A | 1.08E-3 | ESCA | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-766-3p | HNF4A | 1.36E-3 | PRAD | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-34c-5p | HNF4A | 1.38E-3 | PRAD | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-24-3p | HNF4A | 1.38E-3 | PRAD | |
| 5p15.33 | PP7080 | hsa-miR-766-3p | HNF4A | 1.44E-3 | PAAD | |
| 11p15.5 | KCNQ1OT1 | hsa-miR-29b-3p | HNF4A | 1.66E-3 | UCEC | |
| 20q11.23 | SNHG17 | hsa-miR-143-3p | HNF4A | 2.43E-3 | READ | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-216a-5p | HNF4A | 3.31E-3 | KIRC | |
| 8p11.23 | LINC01605 | hsa-miR-34a-5p | HNF4A | 3.35E-3 | TGCT | |
| 14q11.2 | DHRS4-AS1 | hsa-miR-24-3p | HNF4A | 3.47E-3 | KIRC | |
| 20q13.13 | ZFAS1 | hsa-miR-34b-5p | HNF4A | 3.85E-3 | COAD | |
| 9p13.3 | RMRP | hsa-miR-24-3p | HNF4A | 4.21E-3 | BRCA | |
| 9p13.3 | RMRP | hsa-miR-766-3p | HNF4A | 4.26E-3 | BRCA | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 4.41E-3 | READ | |
| 8p11.23 | LINC01605 | hsa-miR-24-3p | HNF4A | 4.69E-3 | TGCT | |
| 8p21.1 | EXTL3-AS1 | hsa-miR-24-3p | HNF4A | 7.39E-3 | SKCM | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-766-3p | HNF4A | 9.37E-3 | KIRP | |
| 22q13.31 | NUP50-AS1 | hsa-miR-765 | HNF4A | 9.50E-3 | THCA | |
| 16p13.3 | LINC00921 | hsa-miR-34c-5p | HNF4A | 1.10E-2 | BRCA | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 1.21E-2 | TGCT | |
| 17p13.3 | MIR22HG | hsa-miR-34a-5p | HNF4A | 1.35E-2 | LUSC | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-24-3p | HNF4A | 1.49E-2 | KIRP | |
| 17p13.3 | MIR22HG | hsa-miR-449a | HNF4A | 1.61E-2 | LUSC | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 1.66E-2 | SKCM | |
| 2p13.3 | PCBP1-AS1 | hsa-miR-34c-5p | HNF4A | 1.66E-2 | KIRP | |
| 7q34 | WEE2-AS1 | hsa-miR-34a-5p | HNF4A | 1.73E-2 | LUAD | |
| 16p13.3 | SNHG9 | hsa-miR-766-3p | HNF4A | 2.11E-2 | SKCM | |
| 9q34.3 | PPP1R26-AS1 | hsa-miR-143-3p | HNF4A | 2.41E-2 | COAD | |
| 20q11.23 | SNHG17 | hsa-miR-143-3p | HNF4A | 2.75E-2 | SKCM | |
| 15q26.1 | PRC1-AS1 | hsa-miR-24-1-5p | HNF4A | 2.96E-2 | ESCA | |
| 20q11.23 | SNHG17 | hsa-miR-143-3p | HNF4A | 3.72E-2 | ESCA | |
| 1p13.3 | LAMTOR5-AS1 | hsa-miR-143-3p | HNF4A | 3.75E-2 | BRCA | |
| 12p13.31 | C1RL-AS1 | hsa-miR-24-3p | HNF4A | 3.84E-2 | KIRP | |
| 11q13.1 | MALAT1 | hsa-miR-34c-5p | HNF4A | 4.27E-2 | ESCA | |