Basic Info
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Basic Information for the CNV-ceRNA event
Cytoband
8q24.21
lncRNA
PVT1 ( ENSG00000249859)
miRNA
hsa-miR-508-5p (MIMAT0004778)
mRNA
GPNMB (ENSG00000136235)
Disease
UVM
FDR
4.16E-2
Reported as biomarkers
![]() Circulating |
![]() Drug resistent |
![]() Survival |
Binding Info
miRNA Binding site information on lncRNA
miRanda target site prediction
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TargetScan target site prediction
miRNA 3' GUACUCACUGCGGGA-GACCUCAU 5' hsa-miR-508-5p | Start: 424 End: 431Site type: 8mer-1a Context++ Score: -0.419 |
miRNA 3' GUACUCACUGCGGGA-GACCUCAU 5' hsa-miR-508-5p | Start: 400 End: 407Site type: 8mer-1a Context++ Score: -0.419 |
miRNA 3' GUACUCACUGCGGGA-GACCUCAU 5' hsa-miR-508-5p | Start: 102 End: 109Site type: 8mer-1a Context++ Score: -0.447 |
miRNA 3' GUACUCACUGCGGGA-GACCUCAU 5' hsa-miR-508-5p | Start: 80 End: 87Site type: 8mer-1a Context++ Score: -0.428 |
miRNA 3' GUACUCACUGCGGGA-GACCUCAU 5' hsa-miR-508-5p | Start: 47 End: 54Site type: 8mer-1a Context++ Score: -0.436 |
RNAbybrid target site prediction
miRNA 3 GUAC G GA CAU 5 hsa-miR-508-5p | Start: 88 End: 108 |
miRNA 3 GUACU C GA 5 hsa-miR-508-5p | Start: 90 End: 110 |