Basic Info
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Basic Information for the SNP-ceRNA event
Variation
rs4240895 chr1:9653328(C/T)
lncRNA
PIK3CD-AS1 ( ENSG00000179840)
miRNA
hsa-miR-30a-3p (MIMAT0000088)
mRNA
SLC7A6 (ENSG00000103064)
Population
EUR_YRI
FDR
2.34E-24
Reported as biomarkers
![]() Circulating |
![]() Drug resistent |
![]() Survival |
Binding Info
Altered binding affnity between reference and alternative allele
miRanda reference allele (loss)
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miRanda alternative allele (gain)
miRNA 3' cgACGUUUGUAGGCUGACUUUc 5' hsa-miR-30a-3p | Start: 37 End: 58Energy: -16.82 kcal/mol Align Score: 164 |
TargetScan reference allele (loss)
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TargetScan alternative allele (loss)
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RNAhybrid reference allele (loss)
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RNAhybrid alternative allele (loss)
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Functions
Dysregulated fucntions of SNP-ceRNA event
Hallmarks
Dysregulated hallmarks of SNP-ceRNA event
Network
The PIK3CD-AS1-associated ceRNA network which were dysregulated by rs4240895