Basic Info
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Basic Information for the SNP-ceRNA event
Variation
rs28360018 chr6:30291528(T/C)
lncRNA
HCG18 ( ENSG00000231074)
miRNA
hsa-miR-3928-3p (MIMAT0018205)
mRNA
DICER1 (ENSG00000100697)
Population
EUR_YRI
FDR
5.74E-29
Reported as biomarkers
![]() Circulating |
![]() Drug resistent |
![]() Survival |
Binding Info
Altered binding affnity between reference and alternative allele
miRanda reference allele (loss)
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miRanda alternative allele (loss)
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TargetScan reference allele (gain)
miRNA 3' CGGCUUCGAGGUUCCAAGGAGG 5' hsa-miR-3928-3p | Start: 53 End: 60Site type: 8mer-1a Context++ Score: -0.403 |
TargetScan alternative allele (loss)
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RNAhybrid reference allele (loss)
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RNAhybrid alternative allele (loss)
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Functions
Dysregulated fucntions of SNP-ceRNA event
Hallmarks
Dysregulated hallmarks of SNP-ceRNA event
Network
The HCG18-associated ceRNA network which were dysregulated by rs28360018