Basic Info
Starting a new search ...

Basic Information for the SNP-ceRNA event
Variation
rs7666252 chr4:189939673(C/T)
lncRNA
FRG1-DT ( ENSG00000245685)
miRNA
hsa-miR-486-5p (MIMAT0002177)
mRNA
CIT (ENSG00000122966)
Population
EUR_YRI
FDR
1.96E-17
Reported as biomarkers
![]() Circulating |
![]() Drug resistent |
![]() Survival |
Binding Info
Altered binding affnity between reference and alternative allele
miRanda reference allele (loss)
|
|
miRanda alternative allele (loss)
|
|
TargetScan reference allele (gain)
miRNA 3' GAGCCCCGUCGAGUCAUGUCCU 5' hsa-miR-486-5p | Start: 69 End: 76Site type: 8mer-1a Context++ Score: -0.403 |
TargetScan alternative allele (gain)
miRNA 3' GAGCCCCGUCGAGUCAUGUCCU 5' hsa-miR-486-5p | Start: 69 End: 76Site type: 8mer-1a Context++ Score: -0.406 |
RNAhybrid reference allele (loss)
|
|
RNAhybrid alternative allele (loss)
|
|
Functions
Dysregulated fucntions of SNP-ceRNA event
Hallmarks
Dysregulated hallmarks of SNP-ceRNA event
Network
The FRG1-DT-associated ceRNA network which were dysregulated by rs7666252