| Detail |
Ctyoband |
LncRNAs |
miRNAs |
mRNAs |
FDR |
Disease |
 |
 | 2q13 | MIR4435-2HG | hsa-miR-1249-3p | PTCH1 | 1.34E-131 | BRCA |       |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 1.84E-47 | BLCA | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 2.06E-37 | PRAD | |
| 9q34.11 | LINC00963 | hsa-miR-1249-3p | PTCH1 | 6.68E-32 | BRCA | |
| 9q34.3 | ARRDC1-AS1 | hsa-miR-1249-3p | PTCH1 | 1.21E-31 | LUSC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 1.40E-28 | LUAD | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 6.24E-27 | HNSC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 4.10E-26 | SKCM | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 4.53E-26 | PCPG | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 4.23E-24 | CESC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 3.38E-23 | COAD | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 2.90E-22 | OV | |
| 17q21.31 | ASB16-AS1 | hsa-miR-1249-3p | PTCH1 | 2.89E-19 | LUSC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 3.44E-19 | UCEC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 6.37E-19 | LIHC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 4.76E-18 | LGG | |
| 1p34.2 | NFYC-AS1 | hsa-miR-1249-3p | PTCH1 | 1.18E-17 | OV | |
| 7q22.1 | STAG3L5P-PVRIG2P-PILRB | hsa-miR-1249-3p | PTCH1 | 1.47E-17 | LUSC | |
| 12q24.31 | LINC01089 | hsa-miR-1249-3p | PTCH1 | 4.94E-17 | LUSC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 6.57E-17 | STAD | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 2.37E-16 | KIRP | |
| 1p34.2 | NFYC-AS1 | hsa-miR-1249-3p | PTCH1 | 5.67E-16 | BLCA | |
| 1p13.1 | ATP1A1-AS1 | hsa-miR-1249-3p | PTCH1 | 9.65E-16 | OV | |
| 12q24.31 | LINC01089 | hsa-miR-1249-3p | PTCH1 | 1.78E-14 | LGG | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 6.41E-14 | PAAD | |
| 9q34.3 | SNHG7 | hsa-miR-1249-3p | PTCH1 | 7.60E-14 | BLCA | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 7.61E-14 | BRCA | |
| 9q34.3 | SNHG7 | hsa-miR-1249-3p | PTCH1 | 7.66E-13 | SKCM | |
| 1p34.2 | SLFNL1-AS1 | hsa-miR-424-5p | PTCH1 | 1.29E-12 | OV | |
| 12q24.31 | LINC01089 | hsa-miR-1249-3p | PTCH1 | 1.83E-12 | BLCA | |
| 1p34.2 | NFYC-AS1 | hsa-miR-1249-3p | PTCH1 | 1.21E-11 | LUSC | |
| 11q12.3 | SNHG1 | hsa-miR-424-5p | PTCH1 | 1.83E-11 | LGG | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 2.85E-11 | SARC | |
| 9q34.3 | SNHG7 | hsa-miR-1249-3p | PTCH1 | 1.84E-10 | LUSC | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 2.68E-10 | PCPG | |
| 8q24.3 | C8orf31 | hsa-miR-1249-3p | PTCH1 | 1.34E-9 | LGG | |
| 9q34.3 | SNHG7 | hsa-miR-1249-3p | PTCH1 | 1.68E-9 | UCEC | |
| 9q34.11 | LINC00963 | hsa-miR-1249-3p | PTCH1 | 3.02E-9 | COAD | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 3.12E-9 | SKCM | |
| 8q24.3 | CTD-2292P10.4 | hsa-miR-424-5p | PTCH1 | 3.27E-9 | BRCA | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 3.89E-9 | KIRC | |
| 17q25.1 | SNHG16 | hsa-miR-212-3p | PTCH1 | 1.81E-8 | THYM | |
| 1p34.2 | SLFNL1-AS1 | hsa-miR-424-5p | PTCH1 | 3.16E-8 | HNSC | |
| 1p13.1 | ATP1A1-AS1 | hsa-miR-1249-3p | PTCH1 | 3.72E-8 | HNSC | |
| 1p13.1 | ATP1A1-AS1 | hsa-miR-1249-3p | PTCH1 | 4.04E-8 | LUAD | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 8.86E-8 | ESCA | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 4.71E-7 | PAAD | |
| 1q25.1 | GAS5 | hsa-miR-1249-3p | PTCH1 | 5.89E-7 | SKCM | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 1.86E-6 | UCEC | |
| 17p11.2 | LRRC75A-AS1 | hsa-miR-1249-3p | PTCH1 | 4.40E-6 | TGCT | |
| 8q22.1 | FLJ46284 | hsa-miR-424-5p | PTCH1 | 1.51E-5 | LUAD | |
| 1q25.1 | GAS5 | hsa-miR-1249-3p | PTCH1 | 2.05E-5 | MESO | |
| 12q24.23 | PXN-AS1 | hsa-miR-212-3p | PTCH1 | 2.64E-5 | BRCA | |
| 1p34.2 | NFYC-AS1 | hsa-miR-1249-3p | PTCH1 | 3.73E-5 | LUAD | |
| 9q34.11 | LINC00963 | hsa-miR-1249-3p | PTCH1 | 7.20E-5 | LUSC | |
| 1p13.1 | ATP1A1-AS1 | hsa-miR-1249-3p | PTCH1 | 1.26E-4 | KIRC | |
| 9q34.11 | LINC00963 | hsa-miR-1249-3p | PTCH1 | 2.06E-4 | HNSC | |
| 8q22.1 | FLJ46284 | hsa-miR-424-5p | PTCH1 | 6.10E-4 | PRAD | |
| 1p34.2 | NFYC-AS1 | hsa-miR-1249-3p | PTCH1 | 6.17E-4 | PCPG | |
| 7q35 | OR2A1-AS1 | hsa-miR-1249-3p | PTCH1 | 1.07E-3 | LUSC | |
| 1p34.2 | SLFNL1-AS1 | hsa-miR-424-5p | PTCH1 | 1.38E-3 | BRCA | |
| 1p34.2 | SLFNL1-AS1 | hsa-miR-424-5p | PTCH1 | 1.72E-3 | COAD | |
| 7q22.1 | STAG3L5P-PVRIG2P-PILRB | hsa-miR-1249-3p | PTCH1 | 1.88E-3 | COAD | |
| 8q24.3 | CTD-2292P10.4 | hsa-miR-424-5p | PTCH1 | 2.53E-3 | LGG | |
| 17q25.1 | SNHG16 | hsa-miR-212-3p | PTCH1 | 2.93E-3 | LGG | |
| 12q24.31 | LINC01089 | hsa-miR-1249-3p | PTCH1 | 6.68E-3 | UCEC | |
| 12q24.31 | LINC01089 | hsa-miR-1249-3p | PTCH1 | 1.19E-2 | CESC | |
| 9q34.11 | LINC00963 | hsa-miR-1249-3p | PTCH1 | 1.66E-2 | KIRC | |
| 3p25.1 | FGD5-AS1 | hsa-miR-1249-3p | PTCH1 | 1.68E-2 | THYM | |
| 7q35 | OR2A1-AS1 | hsa-miR-1249-3p | PTCH1 | 1.68E-2 | BLCA | |
| 11q21 | SCARNA9 | hsa-miR-1249-3p | PTCH1 | 3.19E-2 | LGG | |
| 1p13.1 | ATP1A1-AS1 | hsa-miR-1249-3p | PTCH1 | 3.43E-2 | UCEC | |
| 11q13.1 | MALAT1 | hsa-miR-1249-3p | PTCH1 | 4.15E-2 | PRAD | |
| 11q13.1 | MALAT1 | hsa-miR-212-3p | PTCH1 | 4.83E-2 | PRAD | |