Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name EPB41L4A-AS2
   Synonyms NA
   Region GRCh38_5:112419583-112420978    Sequence
   Ensembl ENSG00000278921
   RefSeq NA
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name head and neck squamous cell carcinoma
   ICD-0-3 C76.0  M8070/3
   Methods RNA-seq, Microarray, qPCR,Western blot
   Sample NPC cell line (CNE1)
   Expression Pattern down-regulated
   Function Description

The relationship of EPB41L4A-AS2 with the clinicopathological features and prognosis of HNSCC patients was evaluated.EPB41L4A-AS2 may be involved in processes associated with the tumor-associated signaling pathway, especially the TGF-B signaling pathway. Low EPB41L4A-AS2 expression was determined,and overexpression of this gene inhibited cell migration and invasion in the EMT model. Moreover, EPB41L4A-AS2 suppressed TGFBR1 expression.A major mechanism of lncRNAs in regulating gene expression involves the interaction with Polycomb repressive complex 2 (PRC2), which catalyzes the trimethylation of histone H3 lysine 27 (H3K27me3) to repress the transcription of specific genes. Considering that the promoter region of TGFBR1 is rich in methylation, we hypothesized that EPB41L4A-AS2 plays a role in inducing the methylation of the TGFBR1 promoter. Competing endogenous RNA (ceRNA) is currently under intense study as a novel mechanism for lncRNA functions, which indicates that RNA transcripts communicate with one another by miRNA response elements.

   Pubmed ID 29490660
   Year 2018
   Title Identification and validation a TGF-B-associated long non-coding RNA of head and neck squamous cell carcinoma by bioinformatics method.
   External Links
   Links for  EPB41L4A-AS2 GenBank       HGNC       lncrnadb       Noncode
   Links for  head and neck squamous cell carcinoma Omim       Cosmic

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