Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name FAL1
   Synonyms FALEC, FAL1, LINC00568, ncRNA-a1
   Region GRCh38_1:150515757-150518032    Sequence
   Ensembl ENSG00000228126
   RefSeq NR_051960
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name colon cancer
   ICD-0-3 C18  
   Methods qPCR, RNA pull-down assay etc.
   Sample cell lines (BT20, HCC1428, HCC202, MCF7, MALME-3M etc.)
   Expression Pattern up-regulated
   Function Description

We identified an oncogene, FAL1, we measured the copy number of FAL1 in 99 cancer cell lines using qPCR and observed FAL1 copy-number gain in 46% of the cell lines. We then extracted the FAL1 RNA expression data from the aforementioned custom RNA array containing 40 cancer cell lines and found a significant and positive correlation between the genomic copy-number and RNA expression of FAL1. FAL1 associates with the epigenetic repressor BMI1 and regulates its stability in order to modulate the transcription of a number of genes including CDKN1A. The oncogenic activity of FAL1 is partially attributable to its repression of p21. FAL1-specific siRNAs significantly inhibit tumor growth in vivo.

   Pubmed ID 25203321
   Year 2014
   Title A functional genomic approach identifies FAL1 as an oncogenic long noncoding RNA that associates with BMI1 and represses p24 expression in cancer.
   External Links
   Links for  FAL1 GenBank       HGNC       lncrnadb       Noncode
   Links for  colon cancer Omim       Cosmic

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