Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name H19
   Synonyms H19, ASM, ASM1, BWS, D11S813E, LINC00008, NCRNA00008, WT2
   Region GRCh38_11:1995176-2001470    Sequence
   Ensembl ENSG00000130600
   RefSeq NR_002196
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name breast cancer
   ICD-0-3 C50  
   Methods qPCR etc.
   Sample breast cancer tissues
   Expression Pattern down-regulated
   Function Description

We identified 2 SNPs significantly associated with breast cancer risk in stage I (P<0.05), but not significantly replicated in stage II. We combined the data from stage I and stage II, and found that, compared with the rs2071095 CC genotype, AA and CA+AA genotypes were associated with significantly decreased risk of breast cancer (adjusted OR 0.83, 95% CI 0.69-0.99; adjusted OR 0.88, 95% CI 0.80-0.98, respectively). Stratified analyses showed that rs2071095 was associated with breast cancer risk in estrogen receptor (ER)-positive patients (P=0.002), but not in ER-negative ones (P=0.332). Expression levels of H19 in breast cancer cases with AA genotype were significantly lower than those with CC genotype. rs2071095 CA and AA genotypes were found to be significantly associated with decreased expression of H19 in breast cancer patients compared with the CC genotype (P = 0.027 and P < 0.001, respectively).

   Pubmed ID 29737472
   Year 2018
   Title SNP rs2071095 in LincRNA H19 is associated with breast cancer risk.
   External Links
   Links for  H19 GenBank       HGNC       lncrnadb       Noncode
   Links for  breast cancer Omim       Cosmic

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