Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

LncRNA centric

Cancer centric

Advanced search

Drug resistant

Circulating

Prognosis

Detail


   LncRNA Name AK027145
   Synonyms NA
   Region GRCh38_21:38273476-38275519    Sequence
   Ensembl NA
   RefSeq NA
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name gastric cancer
   ICD-0-3 C16  
   Methods microarray, qPCR etc.
   Sample cell lines (SGC-7901, SGC-7901, AGS)
   Expression Pattern down-regulated
   Function Description

To confirm the microarray results, we randomly selected two up-regulated lncRNAs (XLOC_000983, XLOC_005104) and six down-regulated lncRNAs (M18204.1, ENST00000548900.1, XLOC_006324, ENST00000420902.1, AK027145, HIX0023999) with log foldchanges > 2 to perform real-time PCR. The results of real-time PCR indicated a consistency of 87.5% between the real-time PCR results and the microarray results in SGC-7901 cells, these also showed a same result between PCR and microarray in AGS cells.

   Pubmed ID 28043146
   Year 2017
   Title Microarray analysis of long non-coding RNAs related to microRNA-148b in gastric cancer.
   External Links
   Links for  AK027145 GenBank       HGNC       lncrnadb       Noncode
   Links for  gastric cancer Omim       Cosmic

CopyRight © College of Bioinformatics Science and Technology, Harbin Medical University, China.