Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name HOTTIP
   Synonyms HOTTIP, HOXA-AS6, HOXA13-AS1, NCRNA00213
   Region GRCh38_7:27198575-27207259    Sequence
   Ensembl ENSG00000243766
   RefSeq NR_037843
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name pancreatic cancer
   ICD-0-3 C25  
   Methods microarray, qPCR, RNAi, Western blot, Cell growth assay, Cell cycle assay etc.
   Sample cell lines (PANC-1, MIA PaCa-2, Capan-2, SW1990, and BxPC-3)
   Expression Pattern up-regulated
   Function Description

Microarray analyses revealed that HOTTIP was one of the most significantly upregulated lncRNAs in PDAC tissues compared with pancreatic tissues. Quantitative PCR further verified that HOTTIP levels were increased in PDAC cell lines and patient samples compared with controls. Functionally, HOTTIP silencing resulted in proliferation arrest by altering cell-cycle progression, and impaired cell invasion by inhibiting epithelial-mesenchymal transition in pancreatic cancer. Additionally, inhibition of HOTTIP potentiated the antitumor effects of gemcitabine in vitro and in vivo. Immunohistochemistry results revealed that higher HOXA13 expression was correlated with lymph node metastasis, poor histological differentiation, and decreased overall survival in PDAC patients.

   Pubmed ID 25889214
   Year 2015
   Title The long non-coding RNA HOTTIP promotes progression and gemcitabine resistance by regulating HOXA13 in pancreatic cancer.
   External Links
   Links for  HOTTIP GenBank       HGNC       lncrnadb       Noncode
   Links for  pancreatic cancer Omim       Cosmic

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