Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name LINC01138
   Synonyms LINC01138, LINC00875, FLJ39739
   Region GRCh38_1:148290889-148519604    Sequence
   Ensembl ENSG00000274020
   RefSeq NR_027468
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name prostate cancer
   ICD-0-3 C61.9  
   Methods microarray, qPCR etc.
   Sample prostate cancer tissues, cell lines (WPMY-1, DU145, PC-3 and LNCaP)
   Expression Pattern up-regulated
   Function Description

To further validate the results, we examined the expression levels in 11 normal prostate tissues and 14 prostate cancer tissues with real-time PCR. All of these lncRNAs except LINC00969, were expressed significantly higher in prostate cancer samples compared with normal prostate tissues, which were consistent with the TCGA and microarray results. Then, the expression levels of ten lncRNAs were validated in the noncancerous prostatic cells WPMY-1 and four human prostate cancer cell lines by qRT-PCR. It turned out that most of the ten lncRNAs were up-regulated in prostate cancer cell lines and showed a similar expression pattern in patient samples. The CCK8 assay showed that knockdown of LINC01138 or SUZ12P1 markedly suppressed cell viability in LNCaP cells.

   Pubmed ID 27556357
   Year 2016
   Title Identification of androgen-responsive lncRNAs as diagnostic and prognostic markers for prostate cancer.
   External Links
   Links for  LINC01138 GenBank       HGNC       lncrnadb       Noncode
   Links for  prostate cancer Omim       Cosmic

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