Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

LncRNA centric

Cancer centric

Advanced search

Drug resistant

Circulating

Prognosis

Detail


   LncRNA Name linc-GGTLC1-7
   Synonyms XLOC_013703, lnc-C20orf3-1
   Region GRCh38_20:23985050-23988779    Sequence
   Ensembl ENSG00000149435
   RefSeq NA
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name breast cancer
   ICD-0-3 C50  
   Methods RNA-seq, qPCR, RNAi, Western blot etc.
   Sample cell line (BT474)
   Expression Pattern down-regulated
   Function Description

Four out of the five lincRNAs showed statistically significant up- or down-regulation in response to HER2 depletion by RT-qPCR similar to what we observed by RNA-seq analysis.

   Pubmed ID 25749757
   Year 2015
   Title Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer.
   External Links
   Links for  linc-GGTLC1-7 GenBank       HGNC       lncrnadb       Noncode
   Links for  breast cancer Omim       Cosmic

CopyRight © College of Bioinformatics Science and Technology, Harbin Medical University, China.