Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name SNHG15
   Synonyms SNHG15, C7orf40, Linc-Myo1g, MYO1GUT, FLJ38860, Linc-Myo1g
   Region GRCh38_7:44983023-44986961    Sequence
   Ensembl ENSG00000232956
   RefSeq NR_003697
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name colon cancer
   ICD-0-3 C18  
   Methods RNA-seq, qPCR etc.
   Sample cell lines (HEK-293T, SW1116, HCT116, SW480, and SW620)
   Expression Pattern down-regulated
   Function Description

Slug is a fast-turnover transcription factor critical for controlling cell fate and cancer cell invasion and metastasis. LncRNA SNHG15 transcription is upregulated in a variety of human cancers according to The Cancer Genome Atlas. Ectopic expression of SNHG15 promoted colon cancer cell migration in vitro, accelerated xenografted tumor growth in vivo, and elevated levels of SNHG15 were associated with poor prognosis for colon cancer patients. Mechanistically, SNHG15 maintains Slug stability in living cells by impeding its ubiquitination and degradation through interaction with the zinc finger domain of Slug.

   Pubmed ID 29604394
   Year 2018
   Title Long non-coding RNA SNHG15 interacts with and stabilizes transcription factor Slug and promotes colon cancer progression.
   External Links
   Links for  SNHG15 GenBank       HGNC       lncrnadb       Noncode
   Links for  colon cancer Omim       Cosmic

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