Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name SNHG20
   Synonyms SNHG20, C17orf86, LINC00338, NCRNA00338, SCARNA16HG, PRO0872, FLJ25582, DKFZp686L05235
   Region GRCh38_17:77086716-77094990    Sequence
   Ensembl ENSG00000234912
   RefSeq NR_027058
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name hepatocellular carcinoma
   ICD-0-3 C22.0  M8170/3
   Methods qPCR etc.
   Sample hepatocellular carcinoma tissues, cell lines (MHCC97L, SMCC-7721, Huh-7, MHCC97H and LO5)
   Expression Pattern up-regulated
   Function Description

We totally identified a set of four lncRNAs(MIR100HG, SERHL, CTD-2574D22.4 and SNHG23) that were significantly correlated with patient's survival. We then measured the expression levels of these four lncRNAs using TCGA data, and found that it was significant.

   Pubmed ID 29684484
   Year 2018
   Title Characterization of long non-coding RNAs to reveal potential prognostic biomarkers in hepatocellular carcinoma.
   External Links
   Links for  SNHG20 GenBank       HGNC       lncrnadb       Noncode
   Links for  hepatocellular carcinoma Omim       Cosmic

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