Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name TRERNA1
   Synonyms TRERNA1, LINC00651, treRNA, ncRNA-a7
   Region GRCh38_20:50040716-50041504    Sequence
   Ensembl ENSG00000231265
   RefSeq NR_051976
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name breast cancer
   ICD-0-3 C50  
   Methods qPCR, Lentiviral infection, Luciferase reporter assay, RNA pull-down assay, Cell proliferation assay etc.
   Sample cell line (MCF7)
   Expression Pattern up-regulated
   Function Description

We found that treRNA is upregulated in paired clinical breast cancer primary and lymph-node metastasis samples, and that its expression stimulates tumour invasion in vitro and metastasis in vivo. Interestingly, we found that treRNA downregulates the expression of the epithelial marker E-cadherin by suppressing the translation of its mRNA. We identified a novel ribonucleoprotein (RNP) complex, consisting of RNA-binding proteins (hnRNP K, FXR1, and FXR2), PUF60 and SF3B3, that is required for this treRNA functions. Translational suppression by treRNA is dependent on the 3'UTR of the E-cadherin mRNA. Taken together, our study indicates a novel mechanism of gene regulation by lncRNAs in cancer progression.

   Pubmed ID 23974796
   Year 2013
   Title Identification of a long non-coding RNA-associated RNP complex regulating metastasis at the translational step.
   External Links
   Links for  TRERNA1 GenBank       HGNC       lncrnadb       Noncode
   Links for  breast cancer Omim       Cosmic

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