Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name BM742401
   Synonyms GATA6-AS1, BM742401, locus5689
   Region GRCh38_18:22166898-22168968    Sequence
   Ensembl ENSG00000266010
   RefSeq NR_102763
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name chronic lymphocytic leukemia
   ICD-0-3  M9823/3
   Methods qPCR, MSP-PCR, Western blot, in vitro knockdown etc.
   Sample bone marrow, cell lines (MEC1 and CLL-AAT)
   Expression Pattern up-regulated
   Function Description

The promoter of BM742401 was unmethylated in normal controls including three each of normal bone marrow, peripheral blood buffy coats, and CD19-sorted peripheral B-cells, but methylated in four (57.1%) CLL cell lines. Functionally, stable overexpression of BM742401 resulted in inhibition of cellular proliferation and enhanced apoptosis through caspase-9-dependent intrinsic but not caspase-8-dependent extrinsic apoptosis pathway, suggesting a tumor suppressor role of BM742401 in CLL. In primary CLL samples, methylation of BM742401 was detected in 43/98 (43.9%) of patients.

   Pubmed ID 27689399
   Year 2016
   Title Epigenetic silencing of tumor suppressor long non-coding RNA BM742401 in chronic lymphocytic leukemia.
   External Links
   Links for  BM742401 GenBank       HGNC       lncrnadb       Noncode
   Links for  chronic lymphocytic leukemia Omim       Cosmic

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