Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name CRCAL-4
   Synonyms NA
   Region NA    Sequence
   Ensembl NA
   RefSeq NA
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name colorectal cancer
   ICD-0-3 C19.9  
   Methods RNA-seq, RT-PCR, in vitro knockdown
   Sample colorectal tissues, Colon cancer cell lines (HCT116 and SW620)
   Expression Pattern up-regulated
   Function Description

Knockdown of CRCAL-3 and CRCAL-4 in colon cancer cells reduced cell viability and colony formation ability, and induced cell cycle arrest. TCGA dataset supported the associations of CRCAL-3 and CRCAL-4 with cell cycle and revealed a co-expression network comprising dysregulated lncRNAs associated with protein-coding genes.

   Pubmed ID 29330370
   Year 2018
   Title A RNA-Sequencing approach for the identification of novel long non-coding RNA biomarkers in colorectal cancer.
   External Links
   Links for  CRCAL-4 GenBank       HGNC       lncrnadb       Noncode
   Links for  colorectal cancer Omim       Cosmic

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