Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name EGFR-AS1
   Synonyms NA
   Region GRCh38_7:55179750-55188934    Sequence
   Ensembl ENSG00000224057
   RefSeq NR_047551
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name squamous cell carcinoma
   ICD-0-3  M8070/3
   Methods qPCR etc.
   Sample cell lines (NCC-NH1, NCC-NH43, NCC-NH73, NCC-NH26, NCC-NH64, NCC-NH119)
   Expression Pattern up-regulated
   Function Description

Remarkably, single-copy G>A nucleotide editing in isogenic models conferred a 70-fold increase in sensitivity due to decreased stability of the EGFR-AS1 long noncoding RNA (lncRNA). In the appropriate context, sensitivity could be recapitulated through EGFR-AS1 knockdown in vitro and in vivo, whereas overexpression was sufficient to induce resistance to TKIs. Reduced EGFR-AS1 levels shifted splicing toward EGFR isoform D, leading to ligand-mediated pathway activation. In co-clinical trials involving patients and patient-derived xenograft (PDX) models, tumor shrinkage was most pronounced in the context of the A/A genotype for EGFR-Q787Q, low expression of EGFR-AS1 and high expression of EGFR isoform D. Our study reveals how a â??silentâ?? mutation influences the levels of a lncRNA, resulting in noncanonical EGFR addiction, and delineates a new predictive biomarker suite for response to EGFR TKIs.

   Pubmed ID 28920960
   Year 2017
   Title Long noncoding RNA EGFR-AS1 mediates epidermal growth factor receptor addiction and modulates treatment response in squamous cell carcinoma
   External Links
   Links for  EGFR-AS1 GenBank       HGNC       lncrnadb       Noncode
   Links for  squamous cell carcinoma Omim       Cosmic

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