Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name ENSG00000260910
   Synonyms LINC00565
   Region GRCh38_13:113926514-113928844    Sequence
   Ensembl ENSG00000260910
   RefSeq NR_047495
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name breast cancer
   ICD-0-3 C50  
   Methods qPCR, SNP array etc.
   Sample breast cancer tissues
   Expression Pattern differential expression
   Function Description

qPCR was used to selectively validate lincRNA-associated CNVs showing a predicted recurrence within 7 pairs. Of 33 qPCR reaction assays for 6 lincRNAs, 28 (85%) were in agreement with the prediction from Nexus. All six calls for sample BC-4 were detected while five calls for BC-5 were not detected.

   Pubmed ID 23267367
   Year 2012
   Title Identifying putative breast cancer-associated long intergenic non-coding RNA loci by high density SNP array analysis.
   External Links
   Links for  ENSG00000260910 GenBank       HGNC       lncrnadb       Noncode
   Links for  breast cancer Omim       Cosmic

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