Lnc2Cancer

Experimentally Supported Human LncRNA and Cancer Associations Database

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   LncRNA Name ENST00000398460
   Synonyms NA
   Region NA    Sequence
   Ensembl NA
   RefSeq NA
   Circulating
   Drug-resisitant
   Prognostic
   MiRNA
   Variant
   TF
   Methylation
   Cancer Name glioblastoma
   ICD-0-3  M9440/3
   Methods Microarray, qPCR, Western blot, Luciferase reporter assay, etc
   Sample cell lines(U87, U251), glioblastoma tissues
   Expression Pattern down-regulation
   Function Description

Taken together, these findings highlight a novel oncogenic function of circRNA in glioblastoma tumorigenesis. To validate these results, 6 circRNAs NR_002791, and ENST00000398460) were selected randomly for qRT-PCR analysis. The results indicated that the expression levels of the 6 lncRNAs and 6 circRNAs detected by qRT-PCR were consistent with those of the microarray assays (Fig. S2). (hsa_circ_0001162, hsa_circ_0006774, hsa_circ_0077232, hsa_circ_0006847, hsa_circ_0037751,and hsa_circ_0083682) and 6 lncRNAs (lnc-BET3L-2:1, NR_002734, NR_037144, NR_024442, NR_002791, and ENST00000398460) were selected randomly for qRT-PCR analysis. The results indicated that the expression levels of the 6 lncRNAs and 6 circRNAs detected by qRT-PCR wereconsistent with those of the microarray assays (Fig. S2) Microarray profiling of circRNA/lncRNA/mRNA in glioblastoma identifies circNT5E as an oncogenic circular RNA and a sponge of miR-422a.

   Pubmed ID 29967262
   Year 2018
   Title CircNT5E acts as a sponge of microRNA-427a to promote glioblastoma tumorigenesis.
   External Links
   Links for  ENST00000398460 GenBank       HGNC       lncrnadb       Noncode
   Links for  glioblastoma Omim       Cosmic

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