The Genomic Atlas of Breast Cancer — the non-coding theme

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  • GABC update 2020.06.15
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  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr6
start 33867506
end 33896914
lncRNA name AK057709
entrez id 100507584
hgnc id HGNC:48991
ensg id ENSG00000249346
refseq id NR_038989
methods microarray, qPCR, RNAi, Western blot etc.
regulated up-regulated
function description From these 127 DE lncRNAs, we selected the top 25 most significant genes for further validation and analysis (electronic supplementary material, table S2). For 23 out of 25 (92%) of the lncRNAs tested, quantitative real-time PCR (qRTPCR) on cDNA templates confirmed the microarray results.
pubmed id 28003470
year 2016
title Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells.
drug X
circulating X
survival X

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