The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Search


Search Breast cancer associated lncRNAs


e.g. lncRNA:"GAS5",e.g. ENSG ID:"ENSG00000234741"


ENSG ID    LncRNA Name

Search Breast cancer associated SNPs


e.g. SNP:"rs10443215"


Search differential methylated lncRNAs


e.g. Gene ID:"ENSG00000229051.1",e.g. Gene Name:"RP5-952N6.1"

e.g. Transcript ID:"ENST00000453347.1",e.g. Transcript Name:"RP5-952N6.1-001"


Gene ID    Transcript ID    Gene Name    Transcript Name

Search lncRNA methylation interaction


e.g. LncRNA Symbol:"ANRIL"


Search lncRNAs with somatic mutations


e.g. LncRNA ID:"ENSG00000144596.7"


Search SNPs on miRNAs


e.g. MiRNA:"miR-101-2",e.g. Gene:"DGCRB"

e.g. SNP:"rs1434536"


MiRNA    Gene    SNP

Search enhancers of breast cancer


e.g. ID:" DE_00042",e.g. Target Gene:"AKT1"


ID    Target Gene

Search Super-Enhancers of breast cancer


e.g. Super-enhancer ID:"SE_01_07200002"


Search Breast cancer associated miRNA


e.g. miRNA:"hsa-let-7a"


Search Breast cancer associated CircRNA


e.g. CircRNA:"circ_0001667"


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