The Genomic Atlas of Breast Cancer — the non-coding theme

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  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr3
start 42770612
end 42773635
lncRNA name BC038366
entrez id 729083
hgnc id HGNC:53019
ensg id ENSG00000225611
refseq id NR_122070
methods microarray, qPCR, RNAi, Western blot etc.
regulated up-regulated
function description From these 127 DE lncRNAs, we selected the top 25 most significant genes for further validation and analysis (electronic supplementary material, table S2). For 23 out of 25 (92%) of the lncRNAs tested, quantitative real-time PCR (qRTPCR) on cDNA templates confirmed the microarray results.
pubmed id 28003470
year 2016
title Primate-specific oestrogen-responsive long non-coding RNAs regulate proliferation and viability of human breast cancer cells.
drug V
circulating V
survival V

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