Detail

Chr	chr3
start	2110409
end	2144241
lncRNA name	ENSG00000227588
entrez id	100873976
hgnc id	HGNC:39986
ensg id	ENSG00000227588
refseq id	NR_046555
methods	qPCR, SNP array etc.
regulated	differential expression
function description	qPCR was used to selectively validate lincRNA-associated CNVs showing a predicted recurrence within 7 pairs. Of 33 qPCR reaction assays for 6 lincRNAs, 28 (85%) were in agreement with the prediction from Nexus. All six calls for sample BC-4 were detected while five calls for BC-5 were not detected.
pubmed id	23267367
year	2012
title	Identifying putative breast cancer-associated long intergenic non-coding RNA loci by high density SNP array analysis.
drug	X
circulating	X
survival	X