The Genomic Atlas of Breast Cancer — the non-coding theme

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  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr1
start 173863900
end 173868882
lncRNA name GAS5
entrez id 60674
hgnc id HGNC:16355
ensg id ENSG00000234741
refseq id NR_002578
methods qPCR, RNAi, Western blot, ISH, MTT assay etc.
regulated down-regulated
function description This negative correlation between miR-21 and GAS5 is also seen in breast tumor specimens. Of interest, GAS5 can also repress miR-21 expression. Whereas ectopic expression of GAS5 suppresses, GAS5-siRNA increases miR-21 expression. Experiments with in vitro cell culture and xenograft mouse model suggest that GAS5 functions as a tumor suppressor.
pubmed id 23933812
year 2013
title Negative regulation of lncRNA GAS5 by miR-21.
drug X
circulating X
survival X

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