The Genomic Atlas of Breast Cancer — the non-coding theme

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  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr3
start 180989762
end 181836880
lncRNA name SOX2OT
entrez id 347689
hgnc id HGNC:20209
ensg id ENSG00000242808
refseq id NR_004053
methods qPCR etc.
regulated up-regulated
function description In this study, we analyzed expression of four long noncoding RNAs (lncRNAs) namely SOX2OT, PTPRG-AS1, ANRASSF1, and ANRIL in 38 breast cancer tissues and their adjacent noncancerous tissues (ANCTs). ANRASSF1 expression was not detected in any noncancerous tissue. All lncRNAs showed significant overexpression in tumor tissues compared with ANCTs.
pubmed id 26409453
year 2016
title Expression analysis of four long noncoding RNAs in breast cancer.
drug X
circulating X
survival X

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