The Genomic Atlas of Breast Cancer — the non-coding theme

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  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr19
start 15828206
end 15836326
lncRNA name UCA1
entrez id 652995
hgnc id HGNC:37126
ensg id ENSG00000214049
refseq id NR_015379
methods qPCR, Western blot, Northern blot, Flow cytometry assay etc.
regulated up-regulated
function description Results from Northern blot analysis indicated that CUDR was detectable only in human placenta but not in other normal tissues. For expression in human cancer cells, CUDR was detected in most cells of different tissue origins. CUDR mRNA was detected in human hepatocellular carcinoma HepG2 and Hep3B cells, human breast carcinoma MCF-7 and MDA-468 cells, human squamous carcinoma HeLa cells, human colon carcinoma HT-29 and CaCO-2 cells, as well as human lung carcinoma Calu-6 cells. However, CUDR was barely detectable in human prostate carcinoma PC3 cells. The differential expression of CUDR between human normal and cancer tissues is further demonstrated in tissues from cancer patients.
pubmed id 17416635
year 2007
title Induction of drug resistance and transformation in human cancer cells by the noncoding RNA CUDR.
drug V
circulating X
survival X

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