The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Detail


Chr chr20
start 23985050
end 23988779
lncRNA name linc-GGTLC1-7
entrez id 92086
hgnc id HGNC:16437
ensg id ENSG00000149435
refseq id NA
methods RNA-seq, qPCR, RNAi, Western blot etc.
regulated down-regulated
function description Four out of the five lincRNAs showed statistically significant up- or down-regulation in response to HER2 depletion by RT-qPCR similar to what we observed by RNA-seq analysis.
pubmed id 25749757
year 2015
title Integrative transcriptome-wide analyses reveal critical HER2-regulated mRNAs and lincRNAs in HER2+ breast cancer.
drug X
circulating X
survival X

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