The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Breast cancer associated SNPs

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Chr Position SNPID Disease/Trait name pvalue PMID
2 146393980 rs13393078 Gene expression of PROSC (probeID ILMN_1748908) in breast tumors 5.60E-23 22522925
2 146393980 rs13393078 Gene expression of BRF2 (probeID ILMN_1665554) in breast tumors 1.00E-22 22522925
2 146393980 rs13393078 Gene expression of ERLIN2 (probeID ILMN_1700549) in breast tumors 1.78E-20 22522925
2 146393980 rs13393078 Gene expression of DDHD2 (probeID ILMN_1705871) in breast tumors 2.87E-19 22522925
2 146393980 rs13393078 Gene expression of LSM1 (probeID ILMN_2218450) in breast tumors 7.06E-18 22522925
2 146393980 rs13393078 Gene expression of WHSC1L1 (probeID ILMN_1697919) in breast tumors 2.51E-16 22522925
2 146393980 rs13393078 Gene expression of RAB11FIP1 (probeID ILMN_2409596) in breast tumors 1.81E-15 22522925
2 146393980 rs13393078 Gene expression of WHSC1L1 (probeID ILMN_1807379) in breast tumors 3.18E-15 22522925
2 146393980 rs13393078 Gene expression of RAB11FIP1 (probeID ILMN_1692219) in breast tumors 1.11E-14 22522925
2 146393980 rs13393078 Gene expression of ASH2L (probeID ILMN_1666933) in breast tumors 1.37E-14 22522925
2 146393980 rs13393078 Gene expression of BAG4 (probeID ILMN_1727996) in breast tumors 1.66E-14 22522925
2 146393980 rs13393078 Gene expression of ERLIN2 (probeID ILMN_1669729) in breast tumors 3.46E-14 22522925
2 146393980 rs13393078 Gene expression of EIF4EBP1 (probeID ILMN_1767324) in breast tumors 2.76E-13 22522925
2 146393980 rs13393078 Gene expression of DDHD2 (probeID ILMN_2179063) in breast tumors 1.91E-12 22522925
2 146393980 rs13393078 Gene expression of ERLIN2 (probeID ILMN_2378664) in breast tumors 1.99E-12 22522925
2 146393980 rs13393078 Gene expression of ZNF703 (probeID ILMN_1699674) in breast tumors 7.11E-10 22522925
2 146393980 rs13393078 Gene expression of PPAPDC1B (probeID ILMN_1675406) in breast tumors 1.18E-09 22522925
2 146393980 rs13393078 Gene expression of LRRC31 (probeID ILMN_1803528) in breast tumors 1.89E-07 22522925
2 146393980 rs13393078 Gene expression of WHSC1L1 (probeID ILMN_1666715) in breast tumors 4.99E-07 22522925
2 146393980 rs13393078 Gene expression of ZNF703 (probeID ILMN_2415128) in breast tumors 7.62E-07 22522925
2 146393980 rs13393078 Gene expression of GOLGA7 (probeID ILMN_1778673) in breast tumors 8.38E-06 22522925
2 146393980 rs13393078 Gene expression of SH3BGRL (probeID ILMN_1702835) in breast tumors 4.73E-05 22522925
2 146393980 rs13393078 Gene expression of CRAT (probeID ILMN_1737992) in breast tumors 7.14E-05 22522925
2 146393980 rs13393078 Gene expression of ZNF703 (probeID ILMN_1714952) in breast tumors 1.36E-04 22522925
2 146393980 rs13393078 Gene expression of NTN4 (probeID ILMN_2113490) in breast tumors 4.40E-04 22522925
2 146393980 rs13393078 Gene expression of FGFR1 (probeID ILMN_2398261) in breast tumors 4.84E-04 22522925
Chr Position SNPID Disease/Trait name pvalue PMID

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