The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Breast cancer associated SNPs

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Chr Position SNPID Disease/Trait name pvalue PMID
4 156376704 rs55663644 Gene expression of MTFR1 (probeID ILMN_1774028) in breast tumors 2.58E-10 22522925
4 156376704 rs55663644 Gene expression of COPS5 (probeID ILMN_1736002) in breast tumors 3.04E-10 22522925
4 156376704 rs55663644 Gene expression of CSPP1 (probeID ILMN_1812353) in breast tumors 6.67E-08 22522925
4 156376704 rs55663644 Gene expression of ARFGEF1 (probeID ILMN_1728471) in breast tumors 2.60E-07 22522925
4 156376704 rs55663644 Gene expression of CSPP1 (probeID ILMN_2393994) in breast tumors 4.52E-07 22522925
4 156376704 rs55663644 Gene expression of HS.369017 (probeID ILMN_1891857) in breast tumors 1.07E-06 22522925
4 156376704 rs55663644 Gene expression of PTDSS1 (probeID ILMN_1688753) in breast tumors 1.85E-06 22522925
4 156376704 rs55663644 Gene expression of TERF1 (probeID ILMN_1694847) in breast tumors 2.00E-05 22522925
4 156376704 rs55663644 Gene expression of LOC642197 (probeID ILMN_1783469) in breast tumors 3.74E-05 22522925
4 156376704 rs55663644 Gene expression of YTHDF3 (probeID ILMN_1657470) in breast tumors 1.19E-04 22522925
4 156376704 rs55663644 Gene expression of LOC642197 (probeID ILMN_1733374) in breast tumors 1.55E-04 22522925
4 156376704 rs55663644 Gene expression of UBE2W (probeID ILMN_1717420) in breast tumors 3.04E-04 22522925
4 156376704 rs55663644 Gene expression of MRPS28 (probeID ILMN_1718424) in breast tumors 3.22E-04 22522925
4 156376704 rs55663644 Gene expression of C8ORF59 (probeID ILMN_1653205) in breast tumors 5.35E-04 22522925
Chr Position SNPID Disease/Trait name pvalue PMID

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