The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

Breast cancer associated SNPs

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Chr Position SNPID Disease/Trait name pvalue PMID
20 17760632 rs7264107 Gene expression of GRB7 (probeID ILMN_1740762) in breast tumors 8.11E-18 22522925
20 17760632 rs7264107 Gene expression of GRB7 (probeID ILMN_2405254) in breast tumors 1.22E-17 22522925
20 17760632 rs7264107 Gene expression of ERBB2 (probeID ILMN_2352131) in breast tumors 1.43E-16 22522925
20 17760632 rs7264107 Gene expression of PERLD1 (probeID ILMN_1805636) in breast tumors 8.77E-16 22522925
20 17760632 rs7264107 Gene expression of GSDMB (probeID ILMN_1666206) in breast tumors 9.18E-16 22522925
20 17760632 rs7264107 Gene expression of C17ORF37 (probeID ILMN_1727078) in breast tumors 1.87E-15 22522925
20 17760632 rs7264107 Gene expression of STARD3 (probeID ILMN_1657095) in breast tumors 2.15E-15 22522925
20 17760632 rs7264107 Gene expression of ORMDL3 (probeID ILMN_1662174) in breast tumors 4.78E-15 22522925
20 17760632 rs7264107 Gene expression of GSDMB (probeID ILMN_2347193) in breast tumors 7.46E-15 22522925
20 17760632 rs7264107 Gene expression of GRB7 (probeID ILMN_1798582) in breast tumors 3.30E-13 22522925
20 17760632 rs7264107 Gene expression of PSMD3 (probeID ILMN_1796430) in breast tumors 8.99E-12 22522925
20 17760632 rs7264107 Gene expression of MED24 (probeID ILMN_1711853) in breast tumors 6.98E-11 22522925
20 17760632 rs7264107 Gene expression of MED24 (probeID ILMN_2388272) in breast tumors 1.22E-09 22522925
20 17760632 rs7264107 Gene expression of ERBB2 (probeID ILMN_1728761) in breast tumors 3.42E-06 22522925
20 17760632 rs7264107 Gene expression of PPARBP (probeID ILMN_1721729) in breast tumors 8.61E-06 22522925
20 17760632 rs7264107 Gene expression of RARA (probeID ILMN_1659206) in breast tumors 3.44E-05 22522925
20 17760632 rs7264107 Gene expression of TCAP (probeID ILMN_1804316) in breast tumors 5.43E-05 22522925
20 17760632 rs7264107 Gene expression of TMEM132A (probeID ILMN_2317923) in breast tumors 6.35E-05 22522925
20 17760632 rs7264107 Gene expression of PNMT (probeID ILMN_1710027) in breast tumors 1.53E-04 22522925
20 17760632 rs7264107 Gene expression of ARHGAP8 (probeID ILMN_2412475) in breast tumors 7.74E-04 22522925
Chr Position SNPID Disease/Trait name pvalue PMID

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