The Genomic Atlas of Breast Cancer — the non-coding theme

Update News

  • GABC update 2020.06.15
  • GABC update 2019.03.20
  • GABC online 2018.08.09
  • Data collection 2018.04.09

About Us

  • Steven Xi Chen:
    steven.chen@miami.edu
  • Yunpeng Zhang:
    YXZ1418@med.miami.edu
  • Peng Wang:
    wpgqy@163.com
  • Shangwei Ning:
    ningsw@ems.hrbmu.edu.cn
  • Xia Li:
    lixia@hrbmu.edu.cn

LncRNAs with somatic mutations

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Chr start end strand Gene miRNA SNP SNP position Allele Ancestral Allele detail
chr9 4860642 4860643 + NULL miR-101-2 rs1053872 flanking region of pre-miRNA C/G C Detail
chr9 4850435 4850436 - NULL miR-101-2 rs462480 flanking region of pre-miRNA A/C A Detail
chr5 160485410 160485411 + NULL miR-146a rs2910164 pre-miRNA G/C G Detail
chr5 160485410 160485411 + NULL miR-146a rs2910164 unspecified miRNA G/C G Detail
chr22 20032705 20032706 + NULL miR-185 rs2008591 pre-miRNA T/C C Detail
chr22 20032549 20032550 + NULL miR-185 rs887205 pre-miRNA A/G A Detail
chr12 53991814 53991815 + NULL miR-196a rs11614913 unspecified miRNA T/C C Detail
chr12 53991814 53991815 + NULL miR-196a2 rs11614913 pre-miRNA T/C C Detail
chr12 53991814 53991815 + NULL miR-196a2 rs11614913 pre-miRNA C/T C Detail
chr12 53991814 53991815 + NULL miR-196a2 rs11614913 pre-miRNA C/T C Detail
chr12 53991814 53991815 + NULL miR-196a2 rs11614913 unspecified miRNA T/C C Detail
chr6 52143817 52143818 + NULL miR-206 rs6920648 pre-miRNA G/A A Detail
chr19 13836477 13836478 + NULL miR-27a rs895819 pre-miRNA A/G T Detail
chr19 13836477 13836478 + NULL miR-27a rs895819 pre-miRNA A/G T Detail
chr19 13836477 13836478 + NULL miR-27a rs895819 pre-miRNA A/G T Detail
chr11 111511839 111511840 + NULL miR-34b rs4938723 pre-miRNA T/C T Detail
chr11 111511839 111511840 + NULL miR-34c rs4938723 pre-miRNA T/C T Detail
chr17 30117164 30117165 + NULL miR-423 rs6505162 pre-miRNA A/C C Detail
chr17 30117164 30117165 + NULL miR-423 rs6505162 pre-miRNA C/A C Detail
chr17 30117164 30117165 + NULL miR-423 rs6505162 pre-miRNA C/A C Detail
chr20 34990447 34990448 - NULL miR-499 rs3746444 pre-miRNA A/G T Detail
chr20 34990447 34990448 - NULL miR-499 rs3746444 unspecified miRNA T/C T Detail
chr10 100975020 100975021 + NULL miR-608 rs4919510 mature-miRNA C/G G Detail
chr12 80935756 80935757 + NULL miR-618 rs2682818 pre-miRNA C/A C Detail
Chr start end strand Gene miRNA SNP SNP position Allele Ancestral Allele detail

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